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CORR
2002
Springer
78views Education» more  CORR 2002»
13 years 7 months ago
Linear-Time Algorithms for Computing Maximum-Density Sequence Segments with Bioinformatics Applications
an abstract optimization problem arising from biomolecular sequence analysis. For a sequence A of pairs (ai, wi) for i = 1, . . . , n and wi > 0, a segment A(i, j) is a consecu...
Michael H. Goldwasser, Ming-Yang Kao, Hsueh-I Lu
DNA
2004
Springer
152views Bioinformatics» more  DNA 2004»
14 years 24 days ago
Compact Error-Resilient Computational DNA Tiling Assemblies
John H. Reif, Sudheer Sahu, Peng Yin
TCBB
2010
114views more  TCBB 2010»
13 years 5 months ago
Cache-Oblivious Dynamic Programming for Bioinformatics
— We present efficient cache-oblivious algorithms for some well-studied string problems in bioinformatics including the longest common subsequence, global pairwise sequence alig...
Rezaul Alam Chowdhury, Hai-son Le, Vijaya Ramachan...
SAC
2002
ACM
13 years 7 months ago
Bioinformatics track
Warren T. Jones, Hasan M. Jamil