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» Global Computing in a Dynamic Network of Tuple Spaces
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BMCBI
2010
149views more  BMCBI 2010»
13 years 7 months ago
RuleMonkey: software for stochastic simulation of rule-based models
Background: The system-level dynamics of many molecular interactions, particularly protein-protein interactions, can be conveniently represented using reaction rules, which can be...
Joshua Colvin, Michael I. Monine, Ryan N. Gutenkun...
IPPS
2008
IEEE
14 years 1 months ago
Performance comparison of SGI Altix 4700 and SGI Altix 3700 Bx2
Suitability of the next generation of high-performance computing systems for petascale simulations will depend on a balance between factors such as processor performance, memory p...
Subhash Saini, Dennis C. Jespersen, Dale Talcott, ...
DIGITALCITIES
2001
Springer
14 years 1 days ago
Little Boxes, Glocalization, and Networked Individualism
Much thinking about digital cities is in terms of community groups. Yet, the world is composed of social networks and not of groups. This paper traces how communities have changed ...
Barry Wellman
EDBT
2009
ACM
302views Database» more  EDBT 2009»
14 years 2 months ago
RankClus: integrating clustering with ranking for heterogeneous information network analysis
As information networks become ubiquitous, extracting knowledge from information networks has become an important task. Both ranking and clustering can provide overall views on in...
Yizhou Sun, Jiawei Han, Peixiang Zhao, Zhijun Yin,...
BMCBI
2010
160views more  BMCBI 2010»
13 years 7 months ago
Identification of functional hubs and modules by converting interactome networks into hierarchical ordering of proteins
Background: Protein-protein interactions play a key role in biological processes of proteins within a cell. Recent high-throughput techniques have generated protein-protein intera...
Young-Rae Cho, Aidong Zhang