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ISMB
1993

150views Computational Biology» more ISMB 1993»

Computationally Efficient Cluster Representation in Molecular Sequence Megaclassification

13 years 8 months ago

Molecular sequence megaclassification is a technique for automated protein sequence analysis and annotation. Implementation of the method has been limited by the need to store and...

David J. States, Nomi L. Harris, Lawrence Hunter

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56

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COCOA
2011
Springer

240views Discrete Geometry» more COCOA 2011»

Algorithmic Aspects of Heterogeneous Biological Networks Comparison

12 years 6 months ago

Download pagesperso.lina.univ-nantes.fr

Biological networks are commonly used to model molecular activity within the cell. Recent experimental studies have shown that the detection of conserved subnetworks across several...

Guillaume Blin, Guillaume Fertin, Hafedh Mohamed-B...

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19

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BIB
2007

139views more BIB 2007»

Petri net modelling of biological networks

13 years 7 months ago

Download chess.eecs.berkeley.edu

Mathematical modelling is increasingly used to get insights into the functioning of complex biological networks. In this context, Petri nets (PNs) have recently emerged as a promi...

Claudine Chaouiya

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21

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SAC
2009
ACM

98views Applied Computing» more SAC 2009»

On a discretizable subclass of instances of the molecular distance geometry problem

14 years 1 months ago

Download www.lix.polytechnique.fr

The molecular distance geometry problem can be formulated as the problem of ﬁnding an immersion in R3 of a given undirected, nonnegatively weighted graph G. In this paper, we di...

Carlile Lavor, Leo Liberti, Antonio Mucherino, Nel...

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14

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ISMB
2003

71views Computational Biology» more ISMB 2003»

Discovering molecular pathways from protein interaction and gene expression data

13 years 8 months ago

Download www.cis.hut.fi

Eran Segal, Haidong Wang, Daphne Koller

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