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DNA
2007
Springer
106views Bioinformatics» more  DNA 2007»
13 years 11 months ago
Hardware Acceleration for Thermodynamic Constrained DNA Code Generation
Reliable DNA computing requires a large pool of oligonucleotides that do not produce cross-hybridize. In this paper, we present a transformed algorithm to calculate the maximum wei...
Qinru Qiu, Prakash Mukre, Morgan Bishop, Daniel J....
CIBCB
2007
IEEE
13 years 11 months ago
Hybrid Architecture for Accelerating DNA Codeword Library Searching
-- A large and reliable DNA codeword library is the key to the success of DNA based computing. Searching for the set of reliable DNA codewords is an NP-hard problem, which can take...
Qinru Qiu, Daniel J. Burns, Qing Wu, Prakash Mukre
CASES
2009
ACM
14 years 2 months ago
CGRA express: accelerating execution using dynamic operation fusion
Coarse-grained reconfigurable architectures (CGRAs) present an appealing hardware platform by providing programmability with the potential for high computation throughput, scalab...
Yongjun Park, Hyunchul Park, Scott A. Mahlke