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GPB
2010
231views Solid Modeling» more  GPB 2010»
13 years 7 months ago
Mining Gene Expression Profiles: An Integrated Implementation of Kernel Principal Component Analysis and Singular Value Decompos
The detection of genes that show similar profiles under different experimental conditions is often an initial step in inferring the biological significance of such genes. Visualiz...
Ferran Reverter, Esteban Vegas, Pedro Sánch...
BCB
2010
175views Bioinformatics» more  BCB 2010»
13 years 5 months ago
Gene set analysis using principal components
We present a new method for identifying gene sets associated with labeled samples, where the labels can be case versus control, or genotype differences. Existing approaches to thi...
Isa Kemal Pakatci, Wei Wang, Leonard McMillan
BMCBI
2008
129views more  BMCBI 2008»
13 years 10 months ago
Motif-directed network component analysis for regulatory network inference
Background: Network Component Analysis (NCA) has shown its effectiveness in discovering regulators and inferring transcription factor activities (TFAs) when both microarray data a...
Chen Wang, Jianhua Xuan, Li Chen, Po Zhao, Yue Wan...
IADIS
2003
13 years 11 months ago
A Facial Expression Analysis Component for Affective Tutoring Systems
Intelligent tutoring systems (ITS) provide individualised instruction. They offer many advantages over the traditional classroom scenario: they are always available, non-judgement...
Scott P. Overmyer, Hamid Gholam Hosseini, Chao Fan...
BMCBI
2010
100views more  BMCBI 2010»
13 years 10 months ago
Trimming of mammalian transcriptional networks using network component analysis
Background: Network Component Analysis (NCA) has been used to deduce the activities of transcription factors (TFs) from gene expression data and the TF-gene binding relationship. ...
Linh M. Tran, Daniel R. Hyduke, James C. Liao