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BMCBI
2006
102views more  BMCBI 2006»
15 years 4 months ago
SNA - a toolbox for the stoichiometric analysis of metabolic networks
Background: Despite recent algorithmic and conceptual progress, the stoichiometric network analysis of large metabolic models remains a computationally challenging problem. Result...
Robert Urbanczik
DKE
2007
153views more  DKE 2007»
15 years 4 months ago
Adaptive similarity search in streaming time series with sliding windows
The challenge in a database of evolving time series is to provide efficient algorithms and access methods for query processing, taking into consideration the fact that the databas...
Maria Kontaki, Apostolos N. Papadopoulos, Yannis M...
JIB
2006
220views more  JIB 2006»
15 years 4 months ago
An assessment of machine and statistical learning approaches to inferring networks of protein-protein interactions
Protein-protein interactions (PPI) play a key role in many biological systems. Over the past few years, an explosion in availability of functional biological data obtained from hi...
Fiona Browne, Haiying Wang, Huiru Zheng, Francisco...
JSAC
2006
157views more  JSAC 2006»
15 years 4 months ago
Traffic grooming in path, star, and tree networks: complexity, bounds, and algorithms
We consider the problem of traffic grooming in WDM path, star, and tree networks. Traffic grooming is a variant of the well-known logical topology design, and is concerned with the...
Shu Huang, Rudra Dutta, George N. Rouskas
SP
2008
IEEE
122views Security Privacy» more  SP 2008»
15 years 4 months ago
Large-scale phylogenetic analysis on current HPC architectures
Abstract. Phylogenetic inference is considered a grand challenge in Bioinformatics due to its immense computational requirements. The increasing popularity and availability of larg...
Michael Ott, Jaroslaw Zola, Srinivas Aluru, Andrew...
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