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» High-performance computing using accelerators
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IPPS
2002
IEEE
14 years 1 months ago
A High Performance Algorithm for Incompressible Flows Using Local Solenoidal Functions
The convergence of iterative methods used to solve the linear systems arising in incompressible flow problems is sensitive to flow parameters such as the Reynolds number, time s...
Sreekanth R. Sambavaram, Vivek Sarin
CLUSTER
2001
IEEE
14 years 11 days ago
Using Multirail Networks in High-Performance Clusters
Using multiple independent networks (also known as rails) is an emerging technique to overcome bandwidth limitations and enhance fault tolerance of current high-performance parall...
Salvador Coll, Eitan Frachtenberg, Fabrizio Petrin...
IPPS
2008
IEEE
14 years 3 months ago
Supporting high performance bioinformatics flat-file data processing using indices
As an essential part of in vitro analysis, biological database query has become more and more important in the research process. A few challenges that are specific to bioinformat...
Xuan Zhang, Gagan Agrawal
CLUSTER
2003
IEEE
14 years 2 months ago
A Cluster-Based Solution for High Performance Hmmpfam Using EARTH Execution Model
Hmmpfam is a widely used computation-intensive bioinformatics software for sequence classification. The contribution of this paper is the first largely scalable and robust clust...
Weirong Zhu, Yanwei Niu, Jizhu Lu, Chuan Shen, Gua...
ICS
1997
Tsinghua U.
14 years 27 days ago
Optimizing Matrix Multiply Using PHiPAC: A Portable, High-Performance, ANSI C Coding Methodology
Modern microprocessors can achieve high performance on linear algebra kernels but this currently requires extensive machine-speci c hand tuning. We have developed a methodology wh...
Jeff Bilmes, Krste Asanovic, Chee-Whye Chin, James...