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ISMB
1993
13 years 8 months ago
Knowledge Discovery in GENBANK
Wedescribe various methods designed to discover knowledge in the GenBanknucleic acid sequence database. Using a grammatical model of gene structure, we create a parse tree of a ge...
Jeffery S. Aaronson, Juergen Haas, G. Christian Ov...
IMSCCS
2006
IEEE
14 years 1 months ago
GenomeBlast: A Web Tool for Small Genome Comparison
Comparative genomics has become an essential approach for identifying homologous gene candidates and their functions, and for studying genome evolution. We developed GenomeBlast, ...
Guoqing Lu, Liying Jiang, Resa M. Kotalik, Thaine ...
AINA
2006
IEEE
13 years 11 months ago
Accelerating HMMer searches on Opteron processors with minimally invasive recoding
HMMer is a widely used tool for protein sequence homology detection, as well as functional annotation of homologous protein sequences, and protein family classification. The HMMer...
Joseph I. Landman, Joydeep Ray, John Paul Walters
BMCBI
2008
91views more  BMCBI 2008»
13 years 7 months ago
t2prhd: a tool to study the patterns of repeat evolution
Background: The models developed to characterize the evolution of multigene families (such as the birth-and-death and the concerted models) have also been applied on the level of ...
Botond Sipos, Kálmán Somogyi, Istv&a...
CEC
2003
IEEE
14 years 24 days ago
Homology gives size control in genetic programming
Abstract- The Maximum Homologous Crossover attempts to preserve similar structures from parents by aligning them according to their homology. In this paper, it is successfully test...
Michael Defoin-Platel, Manuel Clergue, Philippe Co...