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BMCBI
2006
122views more  BMCBI 2006»
13 years 7 months ago
Genome comparison using Gene Ontology (GO) with statistical testing
Background: Automated comparison of complete sets of genes encoded in two genomes can provide insight on the genetic basis of differences in biological traits between species. Gen...
Zhaotao Cai, Xizeng Mao, Songgang Li, Liping Wei
NAR
2000
76views more  NAR 2000»
13 years 7 months ago
Update of KEYnet: a gene and protein names database for biosequences functional organisation
KEYnet is a database where gene and protein names are hierarchically structured. Particular care has been devoted to the search and organisation of synonyms. The structuring is ba...
Domenico Catalano, Flavio Licciulli, Domenica D'El...
ITNG
2006
IEEE
14 years 1 months ago
Evaluating Parallel Computing Systems in Bioinformatics
The utilization of parallel processing in bioinformatics is a relatively new development, and wide spread use of parallel processing in this domain has been limited by the availab...
Erik S. Gough, Michael D. Kane
DAWAK
2005
Springer
14 years 1 months ago
Gene Expression Biclustering Using Random Walk Strategies
A biclustering algorithm, based on a greedy technique and enriched with a local search strategy to escape poor local minima, is proposed. The algorithm starts with an initial rando...
Fabrizio Angiulli, Clara Pizzuti
CSB
2004
IEEE
123views Bioinformatics» more  CSB 2004»
13 years 11 months ago
A New Hardware Architecture for Genomic and Proteomic Sequence Alignment
We describe a novel hardware architecture for genomic and proteomic sequence alignment which achieves a speed-up of two to three orders of magnitude over Smith-Waterman dynamic pr...
Greg Knowles, Paul Gardner-Stephen