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BIB
2006
150views more  BIB 2006»
15 years 2 months ago
Open source tools and toolkits for bioinformatics: significance, and where are we?
This review summarizes important work in open-source bioinformatics software that has occurred over the past couple of years. The survey is intended to illustrate how programs and...
Jason E. Stajich, Hilmar Lapp
124
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FAC
2008
70views more  FAC 2008»
15 years 2 months ago
Mondex , an electronic purse: specification and refinement checks with the Alloy model-finding method
This paper explains how the Alloy model-finding method has been used to check the specification of an electronic purse (also called smart card) system, called the Mondex case study...
Tahina Ramananandro
119
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BIOINFORMATICS
2006
89views more  BIOINFORMATICS 2006»
15 years 2 months ago
Maximum significance clustering of oligonucleotide microarrays
Affymetrix high-density oligonucleotide microarrays measure expression of DNA transcripts using probesets, i.e. multiple probes per transcript. Usually, these multiple measurement...
Dick de Ridder, Frank J. T. Staal, Jacques J. M. v...
90
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FUIN
2008
56views more  FUIN 2008»
15 years 2 months ago
Representing Uncertainty in RuleML
The RuleML initiative defines a normalized markup for expressing and exchange rules in the Semantic Web. However, the syntax of the language is still limited and lacks features for...
Carlos Viegas Damásio, Jeff Z. Pan, Giorgos...
130
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ENTCS
2006
136views more  ENTCS 2006»
15 years 2 months ago
Automated Game Analysis via Probabilistic Model Checking: a case study
It has been recognised for some time that there are close links between the various logics developed for the analysis of multi-agent systems and the many game-theoretic models dev...
Paolo Ballarini, Michael Fisher, Michael Wooldridg...