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BMCBI
2011
12 years 11 months ago
The Proteogenomic Mapping Tool
Background: High-throughput mass spectrometry (MS) proteomics data is increasingly being used to complement traditional structural genome annotation methods. To keep pace with the...
William S. Sanders, Nan Wang, Susan M. Bridges, Br...
LREC
2008
183views Education» more  LREC 2008»
13 years 9 months ago
Active Annotation in the LUNA Italian Corpus of Spontaneous Dialogues
In this paper we present an active approach to annotate with lexical and semantic labels an Italian corpus of conversational human-human and Wizard-of-Oz dialogues. This procedure...
Christian Raymond, Kepa Joseba Rodriguez, Giuseppe...
VLDB
2004
ACM
126views Database» more  VLDB 2004»
14 years 26 days ago
Database Challenges in the Integration of Biomedical Data Sets
The clinical and basic science research domains present exciting and difficult data integration issues. Solving these problems is crucial as current research efforts in the field ...
Rakesh Nagarajan, Mushtaq Ahmed, Aditya Phatak
BMCBI
2006
111views more  BMCBI 2006»
13 years 7 months ago
Using ESTs to improve the accuracy of de novo gene prediction
Background: ESTs are a tremendous resource for determining the exon-intron structures of genes, but even extensive EST sequencing tends to leave many exons and genes untouched. Ge...
Chaochun Wei, Michael R. Brent
BMCBI
2010
155views more  BMCBI 2010»
13 years 7 months ago
FunctSNP: an R package to link SNPs to functional knowledge and dbAutoMaker: a suite of Perl scripts to build SNP databases
Background: Whole genome association studies using highly dense single nucleotide polymorphisms (SNPs) are a set of methods to identify DNA markers associated with variation in a ...
Stephen J. Goodswen, Cedric Gondro, Nathan S. Wats...