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BMCBI
2007
129views more  BMCBI 2007»
13 years 8 months ago
HoughFeature, a novel method for assessing drug effects in three-color cDNA microarray experiments
Background: Three-color microarray experiments can be performed to assess drug effects on the genomic scale. The methodology may be useful in shortening the cycle, reducing the co...
Hongya Zhao, Hong Yan
PSB
2004
13 years 9 months ago
Modeling Cellular Processes with Variational Bayesian Cooperative Vector Quantizer
Gene expression of a cell is controlled by sophisticated cellular processes. The capability of inferring the states of these cellular processes would provide insight into the mech...
Xinghua Lu, Milos Hauskrecht, Roger S. Day
BIBE
2001
IEEE
188views Bioinformatics» more  BIBE 2001»
13 years 11 months ago
Interrelated Two-way Clustering: An Unsupervised Approach for Gene Expression Data Analysis
DNA arrays can be used to measure the expression levels of thousands of genes simultaneously. Currently most research focuses on the interpretation of the meaning of the data. How...
Chun Tang, Li Zhang, Aidong Zhang, Murali Ramanath...
ISMB
2000
13 years 9 months ago
Analysis of Gene Expression Microarrays for Phenotype Classification
Several microarray technologies that monitor the level of expression of a large number of genes have recently emerged. Given DNA-microarray data for a set of cells characterized b...
Andrea Califano, Gustavo Stolovitzky, Yuhai Tu
BMCBI
2007
207views more  BMCBI 2007»
13 years 8 months ago
Discovering biomarkers from gene expression data for predicting cancer subgroups using neural networks and relational fuzzy clus
Background: The four heterogeneous childhood cancers, neuroblastoma, non-Hodgkin lymphoma, rhabdomyosarcoma, and Ewing sarcoma present a similar histology of small round blue cell...
Nikhil R. Pal, Kripamoy Aguan, Animesh Sharma, Shu...