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BMCBI
2011
13 years 1 months ago
The PathOlogist: An Automated Tool for Pathway-Centric Analysis
Background: The PathOlogist is a new tool designed to transform large sets of gene expression data into quantitative descriptors of pathway-level behavior. The tool aims to provid...
Sharon I. Greenblum, Sol Efroni, Carl F. Schaefer,...
TKDE
2012
312views Formal Methods» more  TKDE 2012»
11 years 9 months ago
Efficient Fuzzy Type-Ahead Search in XML Data
—In a traditional keyword-search system over XML data, a user composes a keyword query, submits it to the system, and retrieves relevant answers. In the case where the user has l...
Jianhua Feng, Guoliang Li
RECOMB
2010
Springer
13 years 8 months ago
Algorithms for Detecting Significantly Mutated Pathways in Cancer
Abstract. Recent genome sequencing studies have shown that the somatic mutations that drive cancer development are distributed across a large number of genes. This mutational heter...
Fabio Vandin, Eli Upfal, Benjamin J. Raphael
TCBB
2011
13 years 1 months ago
Data Mining on DNA Sequences of Hepatitis B Virus
: Extraction of meaningful information from large experimental datasets is a key element of bioinformatics research. One of the challenges is to identify genomic markers in Hepatit...
Kwong-Sak Leung, Kin-Hong Lee, Jin Feng Wang, Eddi...
ICDCSW
2002
IEEE
13 years 11 months ago
Taxonomy of Distributed Event-Based Programming Systems
Event-based middleware is currently being applied for application component integration in a range of application domains. As a result, a variety of event services have been propo...
René Meier, Vinny Cahill