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» Identifying Structural Motifs in Proteins
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ICIP
2007
IEEE
14 years 5 months ago
Retina Layer Segmentation and Spatial Alignment of Antibody Expression Levels
The expression levels of rod opsin and glial fibrillary acidic protein (GFAP) capture important structural changes in the retina during injury and recovery. Quantitatively measur...
Nhat Vu, Pratim Ghosh, B. S. Manjunath
ACL
2006
14 years 15 days ago
Semi-Supervised Conditional Random Fields for Improved Sequence Segmentation and Labeling
We present a new semi-supervised training procedure for conditional random fields (CRFs) that can be used to train sequence segmentors and labelers from a combination of labeled a...
Feng Jiao, Shaojun Wang, Chi-Hoon Lee, Russell Gre...
ALGORITHMICA
2008
115views more  ALGORITHMICA 2008»
13 years 11 months ago
Algorithm Engineering for Color-Coding with Applications to Signaling Pathway Detection
Color-coding is a technique to design fixed-parameter algorithms for several NP-complete subgraph isomorphism problems. Somewhat surprisingly, not much work has so far been spent ...
Falk Hüffner, Sebastian Wernicke, Thomas Zich...
ARTMED
2005
87views more  ARTMED 2005»
13 years 11 months ago
Fuzzy attributes of a DNA complex: Development of a fuzzy inference engine for codon-"junk" codon delineation
Codons refer to those parts in a DNA complex encoded towards forming a desired set of proteins. Also coexist in the DNA are noncodons (or "junk" codons) whose functions ...
Tomás Arredondo Vidal, Perambur S. Neelakan...
BMCBI
2010
154views more  BMCBI 2010»
13 years 11 months ago
Binary image representation of a ligand binding site: its application to efficient sampling of a conformational ensemble
Background: Modelling the ligand binding site of a protein is an important component of understanding proteinligand interactions and is being actively studied. Even if the side ch...
Edon Sung, Sangsoo Kim, Whanchul Shin