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NAR
2007
115views more  NAR 2007»
13 years 7 months ago
PReMod: a database of genome-wide mammalian cis-regulatory module predictions
We describe PReMod, a new database of genomewide cis-regulatory module (CRM) predictions for both the human and the mouse genomes. The prediction algorithm, described previously i...
Vincent Ferretti, Christian Poitras, Dominique Ber...
ADMA
2009
Springer
145views Data Mining» more  ADMA 2009»
14 years 2 months ago
A Framework for Multi-Objective Clustering and Its Application to Co-Location Mining
The goal of multi-objective clustering (MOC) is to decompose a dataset into similar groups maximizing multiple objectives in parallel. In this paper, we provide a methodology, arch...
Rachsuda Jiamthapthaksin, Christoph F. Eick, Ricar...
BMCBI
2011
12 years 11 months ago
ENGINES: exploring single nucleotide variation in entire human genomes
Background: Next generation ultra-sequencing technologies are starting to produce extensive quantities of data from entire human genome or exome sequences, and therefore new softw...
Jorge Amigo, Antonio Salas, Christopher Phillips
BMCBI
2005
306views more  BMCBI 2005»
13 years 7 months ago
A method for aligning RNA secondary structures and its application to RNA motif detection
Background: Alignment of RNA secondary structures is important in studying functional RNA motifs. In recent years, much progress has been made in RNA motif finding and structure a...
Jianghui Liu, Jason Tsong-Li Wang, Jun Hu, Bin Tia...
VLDB
1999
ACM
140views Database» more  VLDB 1999»
13 years 12 months ago
Distributed Hypertext Resource Discovery Through Examples
We describe the architecture of a hypertext resource discovery system using a relational database. Such a system can answer questions that combine page contents, metadata, and hyp...
Soumen Chakrabarti, Martin van den Berg, Byron Dom