We describe PReMod, a new database of genomewide cis-regulatory module (CRM) predictions for both the human and the mouse genomes. The prediction algorithm, described previously i...
Vincent Ferretti, Christian Poitras, Dominique Ber...
The goal of multi-objective clustering (MOC) is to decompose a dataset into similar groups maximizing multiple objectives in parallel. In this paper, we provide a methodology, arch...
Rachsuda Jiamthapthaksin, Christoph F. Eick, Ricar...
Background: Next generation ultra-sequencing technologies are starting to produce extensive quantities of data from entire human genome or exome sequences, and therefore new softw...
Background: Alignment of RNA secondary structures is important in studying functional RNA motifs. In recent years, much progress has been made in RNA motif finding and structure a...
Jianghui Liu, Jason Tsong-Li Wang, Jun Hu, Bin Tia...
We describe the architecture of a hypertext resource discovery system using a relational database. Such a system can answer questions that combine page contents, metadata, and hyp...
Soumen Chakrabarti, Martin van den Berg, Byron Dom