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BMCBI
2011
13 years 1 months ago
Multithreaded comparative RNA secondary structure prediction using stochastic context-free grammars
Background: The prediction of the structure of large RNAs remains a particular challenge in bioinformatics, due to the computational complexity and low levels of accuracy of state...
Zsuzsanna Sukosd, Bjarne Knudsen, Morten Vaerum, J...
ICFP
2008
ACM
14 years 7 months ago
Space profiling for parallel functional programs
This paper presents a semantic space profiler for parallel functional programs. Building on previous work in sequential profiling, our tools help programmers to relate runtime res...
Daniel Spoonhower, Guy E. Blelloch, Robert Harper,...
INFOCOM
2005
IEEE
14 years 21 days ago
Improved single-round protocols for remote file synchronization
— Given two versions of a file, a current version located on one machine and an outdated version known only to another machine, the remote file synchronization problem is how t...
Utku Irmak, Svilen Mihaylov, Torsten Suel
ICS
2005
Tsinghua U.
14 years 18 days ago
Improved automatic testcase synthesis for performance model validation
Performance simulation tools must be validated during the design process as functional models and early hardware are developed, so that designers can be sure of the performance of...
Robert H. Bell Jr., Lizy Kurian John
IFIP
2004
Springer
14 years 14 days ago
Behavioural Equivalences for Dynamic Web Data
Peer-to-peer systems, exchanging dynamic documents through Web services, are a simple and effective platform for data integration on the internet. Dynamic documents can contain b...
Sergio Maffeis, Philippa Gardner