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» Implementing Irregular Parallel Algorithms with OpenMP
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IPPS
2010
IEEE
13 years 5 months ago
pFANGS: Parallel high speed sequence mapping for Next Generation 454-roche Sequencing reads
Millions of DNA sequences (reads) are generated by Next Generation Sequencing machines everyday. There is a need for high performance algorithms to map these sequences to the refer...
Sanchit Misra, Ramanathan Narayanan, Wei-keng Liao...
ICPADS
2007
IEEE
14 years 1 months ago
Optimizing Katsevich image reconstruction algorithm on multicore processors
The Katsevich image reconstruction algorithm is the first theoretically exact cone beam image reconstruction algorithm for a helical scanning path in computed tomography (CT). Ho...
Eric Fontaine, Hsien-Hsin S. Lee
EUROPAR
2010
Springer
13 years 8 months ago
Estimating and Exploiting Potential Parallelism by Source-Level Dependence Profiling
Manual parallelization of programs is known to be difficult and error-prone, and there are currently few ways to measure the amount of potential parallelism in the original sequent...
Jonathan Mak, Karl-Filip Faxén, Sverker Jan...
PACT
2009
Springer
14 years 22 hour ago
Parallel Evidence Propagation on Multicore Processors
In this paper, we design and implement an efficient technique for parallel evidence propagation on state-of-the-art multicore processor systems. Evidence propagation is a major ste...
Yinglong Xia, Xiaojun Feng, Viktor K. Prasanna
AINA
2006
IEEE
14 years 1 months ago
On Optimization and Parallelization of Fuzzy Connected Segmentation for Medical Imaging
Fuzzy Connectedness is an important image segmentation routine for image processing of medical images. It is often used in preparation for surgery and sometimes during surgery. It...
Christopher Gammage, Vipin Chaudhary