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BMCBI
2004
208views more  BMCBI 2004»
13 years 8 months ago
Using 3D Hidden Markov Models that explicitly represent spatial coordinates to model and compare protein structures
Background: Hidden Markov Models (HMMs) have proven very useful in computational biology for such applications as sequence pattern matching, gene-finding, and structure prediction...
Vadim Alexandrov, Mark Gerstein
ICCS
2005
Springer
14 years 1 months ago
Bulk Synchronous Parallel ML: Modular Implementation and Performance Prediction
Abstract. BSML is a library for parallel programming with the functional language Objective Caml. It is based on an extension of the λcalculus by parallel operations on a parallel...
Frédéric Loulergue, Fréd&eacu...
BIODATAMINING
2008
117views more  BIODATAMINING 2008»
13 years 8 months ago
Search extension transforms Wiki into a relational system: A case for flavonoid metabolite database
Background: In computer science, database systems are based on the relational model founded by Edgar Codd in 1970. On the other hand, in the area of biology the word 'databas...
Masanori Arita, Kazuhiro Suwa
CAISE
2003
Springer
14 years 1 months ago
Introducing Custom Language Extensions to SQL: 1999
Abstract. Even though SQL has become widely accepted as a language for implementing relational database schemas and querying data, there are cases where s experience the need for n...
Jernej Kovse, Wolfgang Mahnke
ICLP
1998
Springer
14 years 19 days ago
Efficient Implementation of a Linear Logic Programming Language
A number of logic programming languages based on Linear Logic [3] have been proposed. However, the implementation techniques proposed for these languages have relied heavily on th...
Joshua S. Hodas, K. M. Watkins, Naoyuki Tamura, Ky...