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BMCBI
2008
166views more  BMCBI 2008»
13 years 7 months ago
Learning transcriptional regulatory networks from high throughput gene expression data using continuous three-way mutual informa
Background: Probability based statistical learning methods such as mutual information and Bayesian networks have emerged as a major category of tools for reverse engineering mecha...
Weijun Luo, Kurt D. Hankenson, Peter J. Woolf
STOC
2007
ACM
137views Algorithms» more  STOC 2007»
14 years 7 months ago
Testing k-wise and almost k-wise independence
In this work, we consider the problems of testing whether a distribution over {0, 1}n is k-wise (resp. ( , k)-wise) independent using samples drawn from that distribution. For the...
Noga Alon, Alexandr Andoni, Tali Kaufman, Kevin Ma...
JCB
2006
185views more  JCB 2006»
13 years 7 months ago
A Probabilistic Methodology for Integrating Knowledge and Experiments on Biological Networks
Biological systems are traditionally studied by focusing on a specific subsystem, building an intuitive model for it, and refining the model using results from carefully designed ...
Irit Gat-Viks, Amos Tanay, Daniela Raijman, Ron Sh...
KDD
2007
ACM
184views Data Mining» more  KDD 2007»
14 years 7 months ago
Dynamic hybrid clustering of bioinformatics by incorporating text mining and citation analysis
To unravel the concept structure and dynamics of the bioinformatics field, we analyze a set of 7401 publications from the Web of Science and MEDLINE databases, publication years 1...
Bart De Moor, Frizo A. L. Janssens, Wolfgang Gl&au...
EMSOFT
2004
Springer
14 years 22 days ago
Approximation of the worst-case execution time using structural analysis
We present a technique to approximate the worst-case execution time that combines structural analysis with a loop-bounding algorithm based on local induction variable analysis. St...
Matteo Corti, Thomas R. Gross