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BMCBI
2010
125views more  BMCBI 2010»
13 years 7 months ago
Large-scale prediction of protein-protein interactions from structures
Background: The prediction of protein-protein interactions is an important step toward the elucidation of protein functions and the understanding of the molecular mechanisms insid...
Martial Hue, Michael Riffle, Jean-Philippe Vert, W...
AAAI
2012
11 years 10 months ago
Learning the Kernel Matrix with Low-Rank Multiplicative Shaping
Selecting the optimal kernel is an important and difficult challenge in applying kernel methods to pattern recognition. To address this challenge, multiple kernel learning (MKL) ...
Tomer Levinboim, Fei Sha
CEC
2009
IEEE
14 years 2 months ago
Evolutionary design of the energy function for protein structure prediction
— Automatic protein structure predictors use the notion of energy to guide the search towards good candidate structures. The energy functions used by the state-of-the-art predict...
Pawel Widera, Jonathan M. Garibaldi, Natalio Krasn...
BMCBI
2011
13 years 2 months ago
NClassG+: A classifier for non-classically secreted Gram-positive bacterial proteins
Background: Most predictive methods currently available for the identification of protein secretion mechanisms have focused on classically secreted proteins. In fact, only two met...
Daniel Restrepo-Montoya, Camilo Pino, Luis F. Ni&n...
ICML
2010
IEEE
13 years 8 months ago
Large Scale Max-Margin Multi-Label Classification with Priors
We propose a max-margin formulation for the multi-label classification problem where the goal is to tag a data point with a set of pre-specified labels. Given a set of L labels, a...
Bharath Hariharan, Lihi Zelnik-Manor, S. V. N. Vis...