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BMCBI
2008
87views more  BMCBI 2008»
13 years 7 months ago
Volume-based solvation models out-perform area-based models in combined studies of wild-type and mutated protein-protein interfa
Background: Empirical binding models have previously been investigated for the energetics of protein complexation (G models) and for the influence of mutations on complexation (i....
Salim Bougouffa, Jim Warwicker
BMCBI
2008
111views more  BMCBI 2008»
13 years 7 months ago
A perl package and an alignment tool for phylogenetic networks
Background: Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of evolutionary events acting at the population level, like recombin...
Gabriel Cardona, Francesc Rosselló, Gabriel...
BMCBI
2008
110views more  BMCBI 2008»
13 years 7 months ago
Testing for treatment effects on gene ontology
In studies that use DNA arrays to assess changes in gene expression, it is preferable to measure the significance of treatment effects on a group of genes from a pathway or functi...
Taewon Lee, Varsha G. Desai, Cruz Velasco, Robert ...
CORR
2010
Springer
190views Education» more  CORR 2010»
13 years 7 months ago
Bidimensionality and EPTAS
Bidimensionality theory appears to be a powerful framework for the development of metaalgorithmic techniques. It was introduced by Demaine et al. [J. ACM 2005 ] as a tool to obtai...
Fedor V. Fomin, Daniel Lokshtanov, Venkatesh Raman...
CORR
2010
Springer
204views Education» more  CORR 2010»
13 years 7 months ago
Optimization Framework and Graph-Based Approach for Relay-Assisted Bidirectional OFDMA Cellular Networks
This paper considers a relay-assisted bidirectional cellular network where the base station (BS) communicates with each mobile station (MS) using orthogonal frequencydivision multi...
Yuan Liu, Meixia Tao, Bin Li, Hui Shen