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BMCBI
2010
112views more  BMCBI 2010»
13 years 7 months ago
Orientation-dependent backbone-only residue pair scoring functions for fixed backbone protein design
Background: Empirical scoring functions have proven useful in protein structure modeling. Most such scoring functions depend on protein side chain conformations. However, backbone...
Andrew J. Bordner
BMCBI
2008
122views more  BMCBI 2008»
13 years 7 months ago
Grammar-based distance in progressive multiple sequence alignment
Background: We propose a multiple sequence alignment (MSA) algorithm and compare the alignment-quality and execution-time of the proposed algorithm with that of existing algorithm...
David J. Russell, Hasan H. Otu, Khalid Sayood
JCB
2006
185views more  JCB 2006»
13 years 7 months ago
A Probabilistic Methodology for Integrating Knowledge and Experiments on Biological Networks
Biological systems are traditionally studied by focusing on a specific subsystem, building an intuitive model for it, and refining the model using results from carefully designed ...
Irit Gat-Viks, Amos Tanay, Daniela Raijman, Ron Sh...
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MOBIHOC
2008
ACM
14 years 7 months ago
An approximation algorithm for conflict-aware broadcast scheduling in wireless ad hoc networks
Broadcast scheduling is a fundamental problem in wireless ad hoc networks. The objective of a broadcast schedule is to deliver a message from a given source to all other nodes in ...
Reza Mahjourian, Feng Chen, Ravi Tiwari, My T. Tha...
JSSPP
2007
Springer
14 years 1 months ago
A Job Self-scheduling Policy for HPC Infrastructures
The number of distributed high performance computing architectures has increased exponentially these last years. Thus, systems composed by several computational resources provided ...
Francesc Guim, Julita Corbalán