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BIBE
2007
IEEE
128views Bioinformatics» more  BIBE 2007»
14 years 1 months ago
QOMA2: Optimizing the alignment of many sequences
Abstract—We consider the problem of aligning multiple protein sequences with the goal of maximizing the SP (Sum-of-Pairs) score, when the number of sequences is large. The QOMA (...
Xu Zhang, Tamer Kahveci
SIGMOD
2010
ACM
255views Database» more  SIGMOD 2010»
14 years 9 days ago
Large graph processing in the cloud
As the study of graphs, such as web and social graphs, becomes increasingly popular, the requirements of efficiency and programming flexibility of large graph processing tasks c...
Rishan Chen, Xuetian Weng, Bingsheng He, Mao Yang
SIGMOD
2011
ACM
210views Database» more  SIGMOD 2011»
12 years 10 months ago
A platform for scalable one-pass analytics using MapReduce
Today’s one-pass analytics applications tend to be data-intensive in nature and require the ability to process high volumes of data efficiently. MapReduce is a popular programm...
Boduo Li, Edward Mazur, Yanlei Diao, Andrew McGreg...
CGO
2008
IEEE
14 years 1 months ago
Latency-tolerant software pipelining in a production compiler
In this paper we investigate the benefit of scheduling non-critical loads for a higher latency during software pipelining. "Noncritical" denotes those loads that have s...
Sebastian Winkel, Rakesh Krishnaiyer, Robyn Sampso...
KDD
2009
ACM
163views Data Mining» more  KDD 2009»
14 years 8 months ago
Large-scale graph mining using backbone refinement classes
We present a new approach to large-scale graph mining based on so-called backbone refinement classes. The method efficiently mines tree-shaped subgraph descriptors under minimum f...
Andreas Maunz, Christoph Helma, Stefan Kramer