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BMCBI
2011
12 years 11 months ago
Improving pan-genome annotation using whole genome multiple alignment
Background: Rapid annotation and comparisons of genomes from multiple isolates (pan-genomes) is becoming commonplace due to advances in sequencing technology. Genome annotations c...
Samuel V. Angiuoli, Julie C. Dunning Hotopp, Steve...
BMCBI
2008
109views more  BMCBI 2008»
13 years 8 months ago
ConStruct: Improved construction of RNA consensus structures
Background: Aligning homologous non-coding RNAs (ncRNAs) correctly in terms of sequence and structure is an unresolved problem, due to both mathematical complexity and imperfect s...
Andreas Wilm, Kornelia Linnenbrink, Gerhard Steger
ICMCS
2005
IEEE
102views Multimedia» more  ICMCS 2005»
14 years 1 months ago
Optimal packetization of VLC and convolution coded Markov sequences
We consider the problem of packetizing a variable length coded Markov sequence into fixed length packets, while being protected by variable rate channel code. Given the total tra...
Xiaohan Wang, Xiaolin Wu
CSSE
2008
IEEE
13 years 9 months ago
JThreadSpy: A Tool for Improving the Effectiveness of Concurrent System Teaching and Learning
Both teaching and learning multithreaded ing are complex tasks, due to the abstraction of the concepts, the non-determinism of the scheduler, the impossibility of using classical s...
Giovanni Malnati, Caterina Maria Cuva, Claudia Bar...
ICALP
2004
Springer
14 years 1 months ago
The Minimum-Entropy Set Cover Problem
We study graph orientations that minimize the entropy of the in-degree sequence. The problem of finding such an orientation is an interesting special case of the minimum entropy ...
Eran Halperin, Richard M. Karp