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» Improving EAs for Sequencing Problems
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NAACL
2003
13 years 10 months ago
Comma Restoration Using Constituency Information
Automatic restoration of punctuation from unpunctuated text has application in improving the fluency and applicability of speech recognition systems. We explore the possibility t...
Stuart M. Shieber, Xiaopeng Tao
BMCBI
2010
97views more  BMCBI 2010»
13 years 9 months ago
SeqRate: sequence-based protein folding type classification and rates prediction
Background: Protein folding rate is an important property of a protein. Predicting protein folding rate is useful for understanding protein folding process and guiding protein des...
Guan Ning Lin, Zheng Wang, Dong Xu, Jianlin Cheng
BMCBI
2006
112views more  BMCBI 2006»
13 years 9 months ago
Distill: a suite of web servers for the prediction of one-, two- and three-dimensional structural features of proteins
Background: We describe Distill, a suite of servers for the prediction of protein structural features: secondary structure; relative solvent accessibility; contact density; backbo...
Davide Baù, Alberto J. M. Martin, Catherine...
BMCBI
2011
13 years 4 months ago
Shape-based peak identification for ChIP-Seq
Background: The identification of binding targets for proteins using ChIP-Seq has gained popularity as an alternative to ChIP-chip. Sequencing can, in principle, eliminate artifac...
Valerie Hower, Steven N. Evans, Lior Pachter
BMCBI
2010
113views more  BMCBI 2010»
13 years 9 months ago
Unifying generative and discriminative learning principles
Background: The recognition of functional binding sites in genomic DNA remains one of the fundamental challenges of genome research. During the last decades, a plethora of differe...
Jens Keilwagen, Jan Grau, Stefan Posch, Marc Stric...