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» Improving gene set analysis of microarray data by SAM-GS
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BMCBI
2010
115views more  BMCBI 2010»
13 years 7 months ago
Assessment and optimisation of normalisation methods for dual-colour antibody microarrays
Background: Recent advances in antibody microarray technology have made it possible to measure the expression of hundreds of proteins simultaneously in a competitive dual-colour a...
Martin Sill, Christoph Schroder, Jörg D. Hohe...
BMCBI
2006
120views more  BMCBI 2006»
13 years 7 months ago
An improved distance measure between the expression profiles linking co-expression and co-regulation in mouse
Background: Many statistical algorithms combine microarray expression data and genome sequence data to identify transcription factor binding motifs in the low eukaryotic genomes. ...
Ryung S. Kim, Hongkai Ji, Wing Hung Wong
KDD
2005
ACM
137views Data Mining» more  KDD 2005»
14 years 8 months ago
Pattern-based similarity search for microarray data
One fundamental task in near-neighbor search as well as other similarity matching efforts is to find a distance function that can efficiently quantify the similarity between two o...
Haixun Wang, Jian Pei, Philip S. Yu
WABI
2005
Springer
179views Bioinformatics» more  WABI 2005»
14 years 1 months ago
Spectral Clustering Gene Ontology Terms to Group Genes by Function
Abstract. With the invention of biotechnological high throughput methods like DNA microarrays, biologists are capable of producing huge amounts of data. During the analysis of such...
Nora Speer, Christian Spieth, Andreas Zell
BMCBI
2006
118views more  BMCBI 2006»
13 years 7 months ago
Identification of gene expression patterns using planned linear contrasts
Background: In gene networks, the timing of significant changes in the expression level of each gene may be the most critical information in time course expression profiles. With ...
Hao Li, Constance L. Wood, Yushu Liu, Thomas V. Ge...