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GI
2009
Springer
13 years 5 months ago
Implementation of an effective non-bonded interactions kernel for biomolecular simulations on the Cell processor
Abstract: In biomolecular simulations intensive computations are spent in nonbonded interactions kernels, i.e., electrostatic interactions. Therefore this part can be considered as...
Horacio Emilio Pérez Sánchez, Wolfga...
COMPUTE
2010
ACM
14 years 7 days ago
Performance evaluation of speculation-based protocol for read-only transactions
In the literature, speculation-based protocols have been proposed to improve the performance of read-only transactions (ROTs) over the existing two-phase locking (2PL) and snapsho...
Thirumalaisamy Ragunathan, P. Krishna Reddy
BMCBI
2010
164views more  BMCBI 2010»
13 years 5 months ago
Merged consensus clustering to assess and improve class discovery with microarray data
Background: One of the most commonly performed tasks when analysing high throughput gene expression data is to use clustering methods to classify the data into groups. There are a...
T. Ian Simpson, J. Douglas Armstrong, Andrew P. Ja...
GLOBECOM
2009
IEEE
14 years 2 months ago
A Two-Stage Precoding Method Based on Interference Alignment for Interference Channel Systems
— It was shown by Cadambe and Jafar that the interference alignment (IA) algorithm achieves the theoretical bound on degrees of freedom (DOF) for interference channel systems. Ho...
Hakjea Sung, Seokhwan Park, Kyoung-Jae Lee, Inkyu ...
BMCBI
2010
122views more  BMCBI 2010»
13 years 8 months ago
Fast and accurate protein substructure searching with simulated annealing and GPUs
Background: Searching a database of protein structures for matches to a query structure, or occurrences of a structural motif, is an important task in structural biology and bioin...
Alex Stivala, Peter J. Stuckey, Anthony Wirth