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BMCBI
2008
127views more  BMCBI 2008»
13 years 7 months ago
MetaMine - A tool to detect and analyse gene patterns in their environmental context
Background: Modern sequencing technologies allow rapid sequencing and bioinformatic analysis of genomes and metagenomes. With every new sequencing project a vast number of new pro...
Uta Bohnebeck, Thierry Lombardot, Renzo Kottmann, ...
GBRPR
2009
Springer
14 years 1 months ago
Inexact Matching of Large and Sparse Graphs Using Laplacian Eigenvectors
In this paper we propose an inexact spectral matching algorithm that embeds large graphs on a low-dimensional isometric space spanned by a set of eigenvectors of the graph Laplacia...
David Knossow, Avinash Sharma, Diana Mateus, Radu ...
WABI
2009
Springer
117views Bioinformatics» more  WABI 2009»
14 years 1 months ago
A Simulation Study Comparing Supertree and Combined Analysis Methods Using SMIDGen
Background: Supertree methods comprise one approach to reconstructing large molecular phylogenies given multi-marker datasets: trees are estimated on each marker and then combined...
M. Shel Swenson, François Barbançon,...
EUROPAR
2003
Springer
14 years 16 days ago
Improving Performance of Hypermatrix Cholesky Factorization
Abstract. This paper shows how a sparse hypermatrix Cholesky factorization can be improved. This is accomplished by means of efficient codes which operate on very small dense matri...
José R. Herrero, Juan J. Navarro
JSAC
2006
199views more  JSAC 2006»
13 years 7 months ago
IDES: An Internet Distance Estimation Service for Large Networks
The responsiveness of networked applications is limited by communications delays, making network distance an important parameter in optimizing the choice of communications peers. S...
Yun Mao, Lawrence K. Saul, Jonathan M. Smith