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BMCBI
2011
13 years 5 months ago
Comparing genotyping algorithms for Illumina's Infinium whole-genome SNP BeadChips
Background: Illumina’s Infinium SNP BeadChips are extensively used in both small and large-scale genetic studies. A fundamental step in any analysis is the processing of raw all...
Matthew E. Ritchie, Ruijie Liu, Benilton Carvalho,...
SIGIR
2009
ACM
14 years 4 months ago
Extracting structured information from user queries with semi-supervised conditional random fields
When search is against structured documents, it is beneficial to extract information from user queries in a format that is consistent with the backend data structure. As one step...
Xiao Li, Ye-Yi Wang, Alex Acero
BIBE
2006
IEEE
119views Bioinformatics» more  BIBE 2006»
14 years 4 months ago
Large Grain Size Stochastic Optimization Alignment
DNA sequence alignment is a critical step in identifying homology between organisms. The most widely used alignment program, ClustalW, is known to suffer from the local minima pro...
Perry Ridge, Hyrum Carroll, Dan Sneddon, Mark J. C...
SIGIR
2010
ACM
14 years 2 months ago
Personalizing information retrieval for multi-session tasks: the roles of task stage and task type
Dwell time as a user behavior has been found in previous studies to be an unreliable predictor of document usefulness, with contextual factors such as the user’s task needing to...
Jingjing Liu, Nicholas J. Belkin
ECAI
2006
Springer
14 years 2 months ago
Automatic Term Categorization by Extracting Knowledge from the Web
This paper addresses the problem of categorizing terms or lexical entities into a predefined set of semantic domains exploiting the knowledge available on-line in the Web. The prop...
Leonardo Rigutini, Ernesto Di Iorio, Marco Ernande...