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WABI
2005
Springer
179views Bioinformatics» more  WABI 2005»
14 years 1 months ago
Spectral Clustering Gene Ontology Terms to Group Genes by Function
Abstract. With the invention of biotechnological high throughput methods like DNA microarrays, biologists are capable of producing huge amounts of data. During the analysis of such...
Nora Speer, Christian Spieth, Andreas Zell
ACAL
2007
Springer
14 years 2 months ago
An Integrated QAP-Based Approach to Visualize Patterns of Gene Expression Similarity
Abstract. This paper illustrates how the Quadratic Assignment Problem (QAP) is used as a mathematical model that helps to produce a visualization of microarray data, based on the r...
Mario Inostroza-Ponta, Alexandre Mendes, Regina Be...
BMEI
2008
IEEE
13 years 10 months ago
Clustering of High-Dimensional Gene Expression Data with Feature Filtering Methods and Diffusion Maps
The importance of gene expression data in cancer diagnosis and treatment by now has been widely recognized by cancer researchers in recent years. However, one of the major challen...
Rui Xu, Steven Damelin, Boaz Nadler, Donald C. Wun...
BIBE
2007
IEEE
195views Bioinformatics» more  BIBE 2007»
14 years 2 months ago
Finding Clusters of Positive and Negative Coregulated Genes in Gene Expression Data
— In this paper, we propose a system for finding partial positive and negative coregulated gene clusters in microarray data. Genes are clustered together if they show the same p...
Kerstin Koch, Stefan Schönauer, Ivy Jansen, J...
BIBE
2001
IEEE
188views Bioinformatics» more  BIBE 2001»
13 years 11 months ago
Interrelated Two-way Clustering: An Unsupervised Approach for Gene Expression Data Analysis
DNA arrays can be used to measure the expression levels of thousands of genes simultaneously. Currently most research focuses on the interpretation of the meaning of the data. How...
Chun Tang, Li Zhang, Aidong Zhang, Murali Ramanath...