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» Incremental Construction of Structured Hidden Markov Models
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BMCBI
2004
177views more  BMCBI 2004»
13 years 10 months ago
Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model
Background: Certain protein families are highly conserved across distantly related organisms and belong to large and functionally diverse superfamilies. The patterns of conservati...
Andrew F. Neuwald, Jun S. Liu
ISI
2006
Springer
13 years 10 months ago
An Embedded Bayesian Network Hidden Markov Model for Digital Forensics
In the paper we combine a Bayesian Network model for encoding forensic evidence during a given time interval with a Hidden Markov Model (EBN-HMM) for tracking and predicting the de...
Olivier Y. de Vel, Nianjun Liu, Terry Caelli, Tib&...
SSPR
2010
Springer
13 years 8 months ago
Information Theoretical Kernels for Generative Embeddings Based on Hidden Markov Models
Many approaches to learning classifiers for structured objects (e.g., shapes) use generative models in a Bayesian framework. However, state-of-the-art classifiers for vectorial d...
André F. T. Martins, Manuele Bicego, Vittor...
NIPS
1996
13 years 11 months ago
Hidden Markov Decision Trees
We study a time series model that can be viewed as a decision tree with Markov temporal structure. The model is intractable for exact calculations, thus we utilize variational app...
Michael I. Jordan, Zoubin Ghahramani, Lawrence K. ...
BMCBI
2010
87views more  BMCBI 2010»
13 years 10 months ago
Epigenetic domains found in mouse embryonic stem cells via a hidden Markov model
Background: Epigenetics is an important layer of transcriptional control necessary for cell-type specific gene regulation. Recent studies have shown significant epigenetic pattern...
Jessica L. Larson, Guo-Cheng Yuan