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AAIM
2007
Springer
145views Algorithms» more  AAIM 2007»
14 years 1 months ago
Improved Approximation Algorithms for Predicting RNA Secondary Structures with Arbitrary Pseudoknots
We study three closely related problems motivated by the prediction of RNA secondary structures with arbitrary pseudoknots: the MAXIMUM BASE PAIR STACKINGS problem proposed by Ieon...
Minghui Jiang
IPL
2002
125views more  IPL 2002»
13 years 7 months ago
A note concerning the closest point pair algorithm
An algorithm, described by Sedgewick, finds the distance between the closest pair of n given points in a plane using a variant of mergesort. This takes O(n log n) time. To prove t...
Martin Richards
PAIRING
2007
Springer
14 years 1 months ago
Remarks on Cheon's Algorithms for Pairing-Related Problems
— In EUROCRYPT 2006, Cheon proposed breakthrough algorithms for pairing-related problems such as the q-weak/strong Diffie-Hellman problem. Using that the exponents of an element ...
Shunji Kozaki, Taketeru Kutsuma, Kazuto Matsuo
AMC
2007
86views more  AMC 2007»
13 years 7 months ago
Further refinement of pairing computation based on Miller's algorithm
In 2006, Blake, Murty and Xu proposed three refinements to Miller’s algorithm for computing Weil/Tate Pairings. In this paper we extend their work and propose a generalized algo...
Chao-Liang Liu, Gwoboa Horng, Te-Yu Chen
BMCBI
2010
183views more  BMCBI 2010»
13 years 7 months ago
SOPRA: Scaffolding algorithm for paired reads via statistical optimization
Background: High throughput sequencing (HTS) platforms produce gigabases of short read (<100 bp) data per run. While these short reads are adequate for resequencing application...
Adel Dayarian, Todd P. Michael, Anirvan M. Sengupt...