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BMCBI
2006
129views more  BMCBI 2006»
13 years 10 months ago
Fast index based algorithms and software for matching position specific scoring matrices
Background: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs in nucleotide as well as amino acid sequences....
Michael Beckstette, Robert Homann, Robert Giegeric...
XSYM
2004
Springer
108views Database» more  XSYM 2004»
14 years 3 months ago
XIST: An XML Index Selection Tool
XML indices are essential for efficiently processing XML queries which typically have predicates on both structures and values. Since the number of all possible structural and val...
Kanda Runapongsa, Jignesh M. Patel, Rajesh Bordawe...
ICDE
2008
IEEE
132views Database» more  ICDE 2008»
14 years 11 months ago
The Space Complexity of Processing XML Twig Queries Over Indexed Documents
Abstract-- Current twig join algorithms incur high memory costs on queries that involve child-axis nodes. In this paper we provide an analytical explanation for this phenomenon. In...
Mirit Shalem, Ziv Bar-Yossef
ICDE
2007
IEEE
153views Database» more  ICDE 2007»
14 years 4 months ago
An Indexing Structure for Automatic Schema Matching
Querying semantically related data sources depends on the ability to map between their schemas. Unfortunately, in most cases matching between schema is still largely performed man...
Fabien Duchateau, Zohra Bellahsene, Mark Roantree,...
SIGMOD
2000
ACM
173views Database» more  SIGMOD 2000»
14 years 1 months ago
Efficient Algorithms for Mining Outliers from Large Data Sets
In this paper, we propose a novel formulation for distance-based outliers that is based on the distance of a point from its kth nearest neighbor. We rank each point on the basis o...
Sridhar Ramaswamy, Rajeev Rastogi, Kyuseok Shim