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» Indexing and Retrieval for Genomic Databases
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BMCBI
2008
121views more  BMCBI 2008»
15 years 4 months ago
iRefIndex: A consolidated protein interaction database with provenance
Background: Interaction data for a given protein may be spread across multiple databases. We set out to create a unifying index that would facilitate searching for these data and ...
Sabry Razick, George Magklaras, Ian M. Donaldson
EDBT
2010
ACM
153views Database» more  EDBT 2010»
15 years 7 months ago
Beyond pages: supporting efficient, scalable entity search with dual-inversion index
Entity search, a significant departure from page-based retrieval, finds data, i.e., entities, embedded in documents directly and holistically across the whole collection. This pap...
Tao Cheng, Kevin Chen-Chuan Chang
VLDB
2003
ACM
107views Database» more  VLDB 2003»
16 years 4 months ago
A performance study of four index structures for set-valued attributes of low cardinality
The efficient retrieval of data items on set-valued attributes is an important research topic that has attracted little attention so far. We studied and modified four index structu...
Sven Helmer, Guido Moerkotte
BMCBI
2006
108views more  BMCBI 2006»
15 years 4 months ago
RibAlign: a software tool and database for eubacterial phylogeny based on concatenated ribosomal protein subunits
Background: Until today, analysis of 16S ribosomal RNA (rRNA) sequences has been the de-facto gold standard for the assessment of phylogenetic relationships among prokaryotes. How...
Hanno Teeling, Frank Oliver Glöckner
NAR
2007
155views more  NAR 2007»
15 years 3 months ago
Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research
Frequent outbreaks of highly pathogenic avian influenza and the increasing data available for comparative analysis require a central database specialized in influenza viruses (IVs...
Suhua Chang, Jiajie Zhang, Xiaoyun Liao, Xinxing Z...