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SP
2008
IEEE
122views Security Privacy» more  SP 2008»
13 years 6 months ago
Large-scale phylogenetic analysis on current HPC architectures
Abstract. Phylogenetic inference is considered a grand challenge in Bioinformatics due to its immense computational requirements. The increasing popularity and availability of larg...
Michael Ott, Jaroslaw Zola, Srinivas Aluru, Andrew...
ICASSP
2011
IEEE
12 years 10 months ago
Compression using self-similarity-based temporal super-resolution for full-exposure-time video
In order to allow sufficient amount of light into the image sensor, videos captured in poor lighting conditions typically have low frame rate and frame exposure time equals to in...
Mihoko Shimano, Gene Cheung, Imari Sato
INFORMS
2010
107views more  INFORMS 2010»
13 years 5 months ago
A Class Representative Model for Pure Parsimony Haplotyping
Haplotyping estimation from aligned Single Nucleotide Polymorphism (SNP) fragments has attracted more and more attention in the recent years due to its importance in analysis of m...
Daniele Catanzaro, Alessandra Godi, Martine Labb&e...
BMCBI
2008
113views more  BMCBI 2008»
13 years 7 months ago
Investigating selection on viruses: a statistical alignment approach
Background: Two problems complicate the study of selection in viral genomes: Firstly, the presence of genes in overlapping reading frames implies that selection in one reading fra...
Saskia de Groot, Thomas Mailund, Gerton Lunter, Jo...
BMCBI
2005
107views more  BMCBI 2005»
13 years 6 months ago
A stepwise framework for the normalization of array CGH data
Background: In two-channel competitive genomic hybridization microarray experiments, the ratio of the two fluorescent signal intensities at each spot on the microarray is commonly...
Mehrnoush Khojasteh, Wan L. Lam, Rabab Kreidieh Wa...