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» Inferring differentiation pathways from gene expression
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BMCBI
2005
112views more  BMCBI 2005»
13 years 7 months ago
"Harshlighting" small blemishes on microarrays
Background: Microscopists are familiar with many blemishes that fluorescence images can have due to dust and debris, glass flaws, uneven distribution of fluids or surface coatings...
Mayte Suárez-Fariñas, Asifa Haider, ...
CDC
2009
IEEE
179views Control Systems» more  CDC 2009»
14 years 6 days ago
Bayesian network approach to understand regulation of biological processes in cyanobacteria
— Bayesian networks have extensively been used in numerous fields including artificial intelligence, decision theory and control. Its ability to utilize noisy and missing data ...
Thanura R. Elvitigala, Abhay K. Singh, Himadri B. ...
BMCBI
2008
113views more  BMCBI 2008»
13 years 7 months ago
Investigating selection on viruses: a statistical alignment approach
Background: Two problems complicate the study of selection in viral genomes: Firstly, the presence of genes in overlapping reading frames implies that selection in one reading fra...
Saskia de Groot, Thomas Mailund, Gerton Lunter, Jo...
SCFBM
2008
87views more  SCFBM 2008»
13 years 7 months ago
Analysis by siRNA_profile program displays novel thermodynamic characteristics of highly functional siRNA molecules
Objective: Here we report the improved results of a new siRNA design program and analysis tool called siRNA_profile that reveals an additional criterion for bioinformatic search o...
Pirkko Muhonen, Ranga N. Parthasarathy, Anthony J....
BMCBI
2008
120views more  BMCBI 2008»
13 years 7 months ago
Statistical issues in the analysis of Illumina data
Background: Illumina bead-based arrays are becoming increasingly popular due to their high degree of replication and reported high data quality. However, little attention has been...
Mark J. Dunning, Nuno L. Barbosa-Morais, Andy G. L...