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    BMCBI
    2006
    242views more  BMCBI 2006»
    Predicting residue-wise contact orders in proteins by support vector regression
    13 years 8 months ago
    Predicting residue-wise contact orders in proteins by support vector regression
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    Background: The residue-wise contact order (RWCO) describes the sequence separations between the residues of interest and its contacting residues in a protein sequence. It is a ne...
    Jiangning Song, Kevin Burrage
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    BMCBI
    2006
    150views more  BMCBI 2006»
    Predicting protein subcellular locations using hierarchical ensemble of Bayesian classifiers based on Markov chains
    13 years 8 months ago
    Predicting protein subcellular locations using hierarchical ensemble of Bayesian classifiers based on Markov chains
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    Background: The subcellular location of a protein is closely related to its function. It would be worthwhile to develop a method to predict the subcellular location for a given pr...
    Alla Bulashevska, Roland Eils
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    BMCBI
    2006
    93views more  BMCBI 2006»
    A summarization approach for Affymetrix GeneChip data using a reference training set from a large, biologically diverse database
    13 years 8 months ago
    A summarization approach for Affymetrix GeneChip data using a reference training set from a large, biologically diverse database
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    Background: Many of the most popular pre-processing methods for Affymetrix expression arrays, such as RMA, gcRMA, and PLIER, simultaneously analyze data across a set of predetermi...
    Simon Katz, Rafael A. Irizarry, Xue Lin, Mark Trip...
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    BMCBI
    2006
    117views more  BMCBI 2006»
    Incorporating background frequency improves entropy-based residue conservation measures
    13 years 8 months ago
    Incorporating background frequency improves entropy-based residue conservation measures
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    Background: Several entropy-based methods have been developed for scoring sequence conservation in protein multiple sequence alignments. High scoring amino acid positions may corr...
    Kai Wang, Ram Samudrala
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    CN
    2006
    113views more  CN 2006»
    Failure recovery for structured p2p networks: Protocol design and performance under churn
    13 years 8 months ago
    Failure recovery for structured p2p networks: Protocol design and performance under churn
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    Measurement studies indicate a high rate of node dynamics in p2p systems. In this paper, we address the question of how high a rate of node dynamics can be supported by structured...
    Simon S. Lam, Huaiyu Liu
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