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SAC
2006
ACM
13 years 10 months ago
Challenges in the compilation of a domain specific language for dynamic programming
Many combinatorial optimization problems in biosequence analysis are solved via dynamic programming. To increase programming productivity and program reliability, a domain specifi...
Robert Giegerich, Peter Steffen
WOB
2004
120views Bioinformatics» more  WOB 2004»
14 years 3 days ago
Reconfigurable Systems for Sequence Alignment and for General Dynamic Programming
ABSTRACT. Reconfigurable systolic arrays can be adapted to efficiently resolve a wide spectrum of computational problems; parallelism is naturally explored in systolic arrays and r...
Ricardo P. Jacobi, Mauricio Ayala-Rincón, L...
CEC
2010
IEEE
13 years 12 months ago
Generating a novel sort algorithm using Reinforcement Programming
Abstract-- Reinforcement Programming (RP) is a new approach to automatically generating algorithms, that uses reinforcement learning techniques. This paper describes the RP approac...
Spencer K. White, Tony R. Martinez, George L. Rudo...
DAM
2007
91views more  DAM 2007»
13 years 10 months ago
Integer linear programming approaches for non-unique probe selection
In addition to their prevalent use for analyzing gene expression, DNA microarrays are an efficient tool for biological, medical, and industrial applications because of their abil...
Gunnar W. Klau, Sven Rahmann, Alexander Schliep, M...
PPSN
1998
Springer
14 years 2 months ago
Parallel Evolutionary Optimisation with Constraint Propagation
Abstract. This paper describes a parallel model for a distributed memory architecture of a non traditional evolutionary computation method, which integrates constraint propagation ...
Alvaro Ruiz-Andino, Lourdes Araujo, José J....