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ACMSE
2006
ACM
14 years 1 months ago
Automatic quality assessment of Affymetrix GeneChip data
Computing reliable gene expression levels from microarray experiments is a sophisticated process with many potential pitfalls. Quality control is one of the most important steps i...
Steffen Heber, Beate Sick
ICDE
2003
IEEE
101views Database» more  ICDE 2003»
14 years 9 months ago
XomatiQ: Living With Genomes, Proteomes, Relations and a Little Bit of XML
In this paper, we describe a system called XomatiQ to address the problem of integration, querying and correlation of biological data. XomatiQ is an integral part of the genomics ...
Sourav S. Bhowmick, Pedro Cruz, Amey V. Laud
BMCBI
2008
108views more  BMCBI 2008»
13 years 7 months ago
An analysis of the positional distribution of DNA motifs in promoter regions and its biological relevance
Background: Motif finding algorithms have developed in their ability to use computationally efficient methods to detect patterns in biological sequences. However the posterior cla...
Ana C. Casimiro, Susana Vinga, Ana T. Freitas, Arl...
BMCBI
2006
160views more  BMCBI 2006»
13 years 7 months ago
MIMAS: an innovative tool for network-based high density oligonucleotide microarray data management and annotation
Background: The high-density oligonucleotide microarray (GeneChip) is an important tool for molecular biological research aiming at large-scale detection of small nucleotide polym...
Leandro Hermida, Olivier Schaad, Philippe Demougin...
EDBT
2010
ACM
152views Database» more  EDBT 2010»
13 years 11 months ago
Feedback-based annotation, selection and refinement of schema mappings for dataspaces
The specification of schema mappings has proved to be time and resource consuming, and has been recognized as a critical bottleneck to the large scale deployment of data integrati...
Khalid Belhajjame, Norman W. Paton, Suzanne M. Emb...