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» Interaction models for functional regression
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ML
2007
ACM
106views Machine Learning» more  ML 2007»
13 years 7 months ago
Surrogate maximization/minimization algorithms and extensions
Abstract Surrogate maximization (or minimization) (SM) algorithms are a family of algorithms that can be regarded as a generalization of expectation-maximization (EM) algorithms. A...
Zhihua Zhang, James T. Kwok, Dit-Yan Yeung
RECOMB
2003
Springer
14 years 8 months ago
An integrated probabilistic model for functional prediction of proteins
We develop an integrated probabilistic model to combine protein physical interactions, genetic interactions, highly correlated gene expression network, protein complex data, and d...
Minghua Deng, Ting Chen, Fengzhu Sun
BMCBI
2004
229views more  BMCBI 2004»
13 years 7 months ago
Automatic annotation of protein motif function with Gene Ontology terms
Background: Conserved protein sequence motifs are short stretches of amino acid sequence patterns that potentially encode the function of proteins. Several sequence pattern search...
Xinghua Lu, Chengxiang Zhai, Vanathi Gopalakrishna...
PAMI
2010
132views more  PAMI 2010»
13 years 6 months ago
Maximum Likelihood Model Selection for 1-Norm Soft Margin SVMs with Multiple Parameters
—Adapting the hyperparameters of support vector machines (SVMs) is a challenging model selection problem, especially when flexible kernels are to be adapted and data are scarce....
Tobias Glasmachers, Christian Igel
ICSM
2007
IEEE
14 years 2 months ago
On the prediction of the evolution of libre software projects
Libre (free / open source) software development is a complex phenomenon. Many actors (core developers, casual contributors, bug reporters, patch submitters, users, etc.), in many ...
Israel Herraiz, Jesús M. González-Ba...