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BMCBI
2010
175views more  BMCBI 2010»
13 years 10 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
FSTTCS
1998
Springer
14 years 2 months ago
Alternative Computational Models: A Comparison of Biomolecular and Quantum Computation
Molecular Computation (MC) is massively parallel computation where data is stored and processed within objects of molecular size. Biomolecular Computation (BMC) is MC using biotec...
John H. Reif
ISPDC
2005
IEEE
14 years 3 months ago
GMRES Method on Lightweight GRID System
Grid computing accomplishes high throughput computing by using a very large number of unexploited computing resources. We present a parallel method GMRES to solve large sparse lin...
Haiwu He, Guy Bergére, Serge G. Petiton
CCGRID
2005
IEEE
14 years 3 months ago
Secret sequence comparison on public grid computing resources
Once a new gene has been sequenced, it must be verified whether or not it is similar to previously sequenced genes. In many cases, the organization that sequenced a potentially n...
Ken-ichi Kurata, Hiroshi Nakamura, Vincent Breton
ICCS
2004
Springer
14 years 3 months ago
Parallel Importance Separation for Multiple Integrals and Integral Equations
In this paper we present error and performance analysis of a Monte Carlo variance reduction method for solving multidimensional integrals and integral equations. This method, calle...
Sofiya Ivanovska, Aneta Karaivanova