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» Interoperability between Bioinformatics Tools: A Logic Progr...
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APLAS
2010
ACM
13 years 7 months ago
Typechecking Higher-Order Security Libraries
Abstract. We propose a flexible method for verifying the security of ML programs that use cryptography and recursive data structures. Our main applications are X.509 certificate ch...
Karthikeyan Bhargavan, Cédric Fournet, Nata...
CAV
2007
Springer
110views Hardware» more  CAV 2007»
14 years 1 months ago
Hector: Software Model Checking with Cooperating Analysis Plugins
We present Hector, a software tool for combining different abstraction methods to extract sound models of heap-manipulating imperative programs with recursion. Extracted models ma...
Nathaniel Charlton, Michael Huth
PLDI
2010
ACM
14 years 17 days ago
Mixing type checking and symbolic execution
Static analysis designers must carefully balance precision and efficiency. In our experience, many static analysis tools are built around an elegant, core algorithm, but that alg...
Yit Phang Khoo, Bor-Yuh Evan Chang, Jeffrey S. Fos...
BMCBI
2008
99views more  BMCBI 2008»
13 years 7 months ago
Multiple organism algorithm for finding ultraconserved elements
Background: Ultraconserved elements are nucleotide or protein sequences with 100% identity (no mismatches, insertions, or deletions) in the same organism or between two or more or...
Scott Christley, Neil F. Lobo, Gregory R. Madey
BMCBI
2006
159views more  BMCBI 2006»
13 years 7 months ago
MultiSeq: unifying sequence and structure data for evolutionary analysis
Background: Since the publication of the first draft of the human genome in 2000, bioinformatic data have been accumulating at an overwhelming pace. Currently, more than 3 million...
Elijah Roberts, John Eargle, Dan Wright, Zaida Lut...