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BMCBI
2005
132views more  BMCBI 2005»
13 years 9 months ago
Kalign - an accurate and fast multiple sequence alignment algorithm
Background: The alignment of multiple protein sequences is a fundamental step in the analysis of biological data. It has traditionally been applied to analyzing protein families f...
Timo Lassmann, Erik L. L. Sonnhammer
BMCBI
2005
97views more  BMCBI 2005»
13 years 9 months ago
Phylogenetic reconstruction of ancestral character states for gene expression and mRNA splicing data
Background: As genomes evolve after speciation, gene content, coding sequence, gene expression, and splicing all diverge with time from ancestors with close relatives. A minimum e...
Roald Rossnes, Ingvar Eidhammer, David A. Liberles
BMCBI
2005
86views more  BMCBI 2005»
13 years 9 months ago
WebArray: an online platform for microarray data analysis
Background: Many cutting-edge microarray analysis tools and algorithms, including commonly used limma and affy packages in Bioconductor, need sophisticated knowledge of mathematic...
Xiaoqin Xia, Michael McClelland, Yipeng Wang
TMC
2008
192views more  TMC 2008»
13 years 9 months ago
A Bidding Algorithm for Optimized Utility-Based Resource Allocation in Ad Hoc Networks
Abstract-- This article proposes a scheme for bandwidth allocation in wireless ad hoc networks. The quality of service (QoS) levels for each end-to-end flow are expressed using a r...
Calin Curescu, Simin Nadjm-Tehrani
JMM2
2007
96views more  JMM2 2007»
13 years 9 months ago
Software Watermarking Resilient to Debugging Attacks
Abstract— In 2006, Gaurav Gupta and Josef Pieprzyk presented an attack on the branch-based software watermarking scheme proposed by Ginger Myles and Hongxia Jin in 2005. The softw...
Gaurav Gupta, Josef Pieprzyk