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    » Inverse Sequence Alignment from Partial Examples
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    NAR
    2007
    152views more  NAR 2007»
    COMPASS server for remote homology inference
    13 years 8 months ago
    COMPASS server for remote homology inference
    Download  prodata.swmed.edu
    COMPASS is a method for homology detection and local alignment construction based on the comparison of multiple sequence alignments (MSAs). The method derives numerical profiles f...
    Ruslan Sadreyev, Ming Tang, Bong-Hyun Kim, Nick V....
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    BMCBI
    2005
    162views more  BMCBI 2005»
    Accelerated probabilistic inference of RNA structure evolution
    13 years 8 months ago
    Accelerated probabilistic inference of RNA structure evolution
    Download  biowiki.org
    Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
    Ian Holmes
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    CIKM
    2011
    Springer
    191views Information Technology» more  CIKM 2011»
    Partial duplicate detection for large book collections
    12 years 8 months ago
    Partial duplicate detection for large book collections
    Download  www.cs.umass.edu
    A framework is presented for discovering partial duplicates in large collections of scanned books with optical character recognition (OCR) errors. Each book in the collection is r...
    Ismet Zeki Yalniz, Ethem F. Can, R. Manmatha
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    BMCBI
    2008
    130views more  BMCBI 2008»
    An enhanced partial order curve comparison algorithm and its application to analyzing protein folding trajectories
    13 years 8 months ago
    An enhanced partial order curve comparison algorithm and its application to analyzing protein folding trajectories
    Download  www.biomedcentral.com
    Background: Understanding how proteins fold is essential to our quest in discovering how life works at the molecular level. Current computation power enables researchers to produc...
    Hong Sun, Hakan Ferhatosmanoglu, Motonori Ota, Yus...
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    BMCBI
    2010
    133views more  BMCBI 2010»
    Improving de novo sequence assembly using machine learning and comparative genomics for overlap correction
    13 years 8 months ago
    Improving de novo sequence assembly using machine learning and comparative genomics for overlap correction
    Download  www.biomedcentral.com
    Background: With the rapid expansion of DNA sequencing databases, it is now feasible to identify relevant information from prior sequencing projects and completed genomes and appl...
    Lance E. Palmer, Mathäus Dejori, Randall A. B...
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