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    BMCBI
    2005
    94views more  BMCBI 2005»
    Visualization-based discovery and analysis of genomic aberrations in microarray data
    13 years 7 months ago
    Visualization-based discovery and analysis of genomic aberrations in microarray data
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    Background: Chromosomal copy number changes (aneuploidies) play a key role in cancer progression and molecular evolution. These copy number changes can be studied using microarray...
    Chad L. Myers, Xing Chen, Olga G. Troyanskaya
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    BMCBI
    2010
    153views more  BMCBI 2010»
    Starr: Simple Tiling ARRay analysis of Affymetrix ChIP-chip data
    13 years 7 months ago
    Starr: Simple Tiling ARRay analysis of Affymetrix ChIP-chip data
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    Background: Chromatin immunoprecipitation combined with DNA microarrays (ChIP-chip) is an assay used for investigating DNA-protein-binding or post-translational chromatin/histone ...
    Benedikt Zacher, Pei Fen Kuan, Achim Tresch
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    BMCBI
    2006
    106views more  BMCBI 2006»
    Methodological study of affine transformations of gene expression data with proposed robust non-parametric multi-dimensional nor
    13 years 7 months ago
    Methodological study of affine transformations of gene expression data with proposed robust non-parametric multi-dimensional nor
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    Background: Low-level processing and normalization of microarray data are most important steps in microarray analysis, which have profound impact on downstream analysis. Multiple ...
    Henrik Bengtsson, Ola Hössjer
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    BMCBI
    2004
    132views more  BMCBI 2004»
    Two-stage normalization using background intensities in cDNA microarray data
    13 years 7 months ago
    Two-stage normalization using background intensities in cDNA microarray data
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    Background: In the microarray experiment, many undesirable systematic variations are commonly observed. Normalization is the process of removing such variation that affects the me...
    Dankyu Yoon, Sung-Gon Yi, Ju-Han Kim, Taesung Park
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    CBMS
    2007
    IEEE
    120views Medical Imaging» more  CBMS 2007»
    Influence of Dictionary Size on the Lossless Compression of Microarray Images
    14 years 2 months ago
    Influence of Dictionary Size on the Lossless Compression of Microarray Images
    Download  tintin.sfsu.edu
    A key challenge in the management of microarray data is the large size of images that constitute the output of microarray experiments. Therefore, only the expression values extrac...
    Robert Bierman, Rahul Singh
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