Analysis of massive graphs has emerged as an important area for massively parallel computation. In this paper, it is shown how the Fresh Breeze trees-of-chunks memory model may be...
In this paper we describe the parallelization of a dynamic programming algorithm used to find common RNA secondary structures including pseudoknots and similar structures. The se...
Abstract. This paper presents parallel approaches to the complete transient numerical analysis of stochastic reward nets (SRNs) for both shared and distributed-memory machines. Par...
Abstract. To solve problems that require far more memory than a single machine can supply, data can be swapped to disk in some manner, it can be compressed, and/or the memory of mu...
The parallel realization of adaptive finite element methods (FEM) has to deal with several irregular and dynamic algorithmic properties caused by adaptive mesh refinement (AMR). ...