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BMCBI
2008
80views more  BMCBI 2008»
13 years 9 months ago
Towards an automatic classification of protein structural domains based on structural similarity
Background: Formal classification of a large collection of protein structures aids the understanding of evolutionary relationships among them. Classifications involving manual ste...
Vichetra Sam, Chin-Hsien Tai, Jean Garnier, Jean-F...
BMCBI
2004
128views more  BMCBI 2004»
13 years 8 months ago
Structural characterization of genomes by large scale sequence-structure threading: application of reliability analysis in struc
Background: We establish that the occurrence of protein folds among genomes can be accurately described with a Weibull function. Systems which exhibit Weibull character can be int...
Artem Cherkasov, Shannan J. Ho Sui, Robert C. Brun...
BMCBI
2005
101views more  BMCBI 2005»
13 years 9 months ago
PALSSE: A program to delineate linear secondary structural elements from protein structures
Background: The majority of residues in protein structures are involved in the formation of helices and -strands. These distinctive secondary structure patterns can be used to rep...
Indraneel Majumdar, S. Sri Krishna, Nick V. Grishi...
ISMB
1993
13 years 10 months ago
Probabilistic Structure Calculations: A Three-Dimensional tRNA Structure from Sequence Correlation Data
Algorithmsbasedonprobability theorycanaddressissues of uncertainty directly throughtheir representational frameworkandtheir theoryfor data combination.In this paper, wediscuss the...
Russ B. Altman
CIKM
2004
Springer
14 years 2 months ago
Discovering frequently changing structures from historical structural deltas of unordered XML
Recently, a large amount of work has been done in XML data mining. However, we observed that most of the existing works focus on the snapshot XML data, while XML data is dynamic i...
Qiankun Zhao, Sourav S. Bhowmick, Mukesh K. Mohani...