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» Iterative methods for Robbins problems
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CP
2003
Springer
14 years 1 months ago
A SAT-Based Approach to Multiple Sequence Alignment
Multiple sequence alignment is a central problem in Bioinformatics. A known integer programming approach is to apply branch-and-cut to exponentially large graph-theoretic models. T...
Steven David Prestwich, Desmond G. Higgins, Orla O...
DATAMINE
2006
89views more  DATAMINE 2006»
13 years 8 months ago
Scalable Clustering Algorithms with Balancing Constraints
Clustering methods for data-mining problems must be extremely scalable. In addition, several data mining applications demand that the clusters obtained be balanced, i.e., be of ap...
Arindam Banerjee, Joydeep Ghosh
IJCV
2006
299views more  IJCV 2006»
13 years 8 months ago
Graph Cuts and Efficient N-D Image Segmentation
Combinatorial graph cut algorithms have been successfully applied to a wide range of problems in vision and graphics. This paper focusses on possibly the simplest application of gr...
Yuri Boykov, Gareth Funka-Lea
JMLR
2006
169views more  JMLR 2006»
13 years 8 months ago
Bayesian Network Learning with Parameter Constraints
The task of learning models for many real-world problems requires incorporating domain knowledge into learning algorithms, to enable accurate learning from a realistic volume of t...
Radu Stefan Niculescu, Tom M. Mitchell, R. Bharat ...
JCB
2007
146views more  JCB 2007»
13 years 8 months ago
MSOAR: A High-Throughput Ortholog Assignment System Based on Genome Rearrangement
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving variou...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...