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BIBM
2010
IEEE
156views Bioinformatics» more  BIBM 2010»
13 years 4 months ago
Truncation of protein sequences for fast profile alignment with application to subcellular localization
We have recently found that the computation time of homology-based subcellular localization can be substantially reduced by aligning profiles up to the cleavage site positions of s...
Man-Wai Mak, Wei Wang, Sun-Yuan Kung
SIGMOD
2009
ACM
250views Database» more  SIGMOD 2009»
14 years 7 months ago
Query processing techniques for solid state drives
Solid state drives perform random reads more than 100x faster than traditional magnetic hard disks, while offering comparable sequential read and write bandwidth. Because of their...
Dimitris Tsirogiannis, Stavros Harizopoulos, Mehul...
RTSS
2006
IEEE
14 years 22 days ago
Run-Time Services for Hybrid CPU/FPGA Systems on Chip
Modern FPGA devices, which include (multiple) processor core(s) as diffused IP on the silicon die, provide an excellent platform for developing custom multiprocessor systems-on-pr...
Jason Agron, Wesley Peck, Erik Anderson, David L. ...
CEC
2005
IEEE
14 years 10 days ago
Multiobjective clustering around medoids
Abstract- The large majority of existing clustering algorithms are centered around the notion of a feature, that is, individual data items are represented by their intrinsic proper...
Julia Handl, Joshua D. Knowles
PLDI
2003
ACM
13 years 12 months ago
Checking and inferring local non-aliasing
In prior work [15] we studied a language construct restrict that allows programmers to specify that certain pointers are not aliased to other pointers used within a lexical scope....
Alexander Aiken, Jeffrey S. Foster, John Kodumal, ...