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SPAA
2012
ACM
11 years 10 months ago
Allowing each node to communicate only once in a distributed system: shared whiteboard models
In this paper we study distributed algorithms on massive graphs where links represent a particular relationship between nodes (for instance, nodes may represent phone numbers and ...
Florent Becker, Adrian Kosowski, Nicolas Nisse, Iv...
BIOINFORMATICS
2012
11 years 10 months ago
Epigenetic priors for identifying active transcription factor binding sites
Motivation Accurate knowledge of the genome-wide binding of transcription factors in a particular cell type or under a particular condition is necessary for understanding transcri...
Gabriel Cuellar-Partida, Fabian A. Buske, Robert C...
STOC
2009
ACM
271views Algorithms» more  STOC 2009»
14 years 8 months ago
A fast and efficient algorithm for low-rank approximation of a matrix
The low-rank matrix approximation problem involves finding of a rank k version of a m ? n matrix AAA, labeled AAAk, such that AAAk is as "close" as possible to the best ...
Nam H. Nguyen, Thong T. Do, Trac D. Tran
BMCBI
2010
240views more  BMCBI 2010»
13 years 7 months ago
TAM: A method for enrichment and depletion analysis of a microRNA category in a list of microRNAs
Background: MicroRNAs (miRNAs) are a class of important gene regulators. The number of identified miRNAs has been increasing dramatically in recent years. An emerging major challe...
Ming Lu, Bing Shi, Juan Wang, Qun Cao, Qinghua Cui
BMCBI
2006
113views more  BMCBI 2006»
13 years 7 months ago
In silico discovery of human natural antisense transcripts
Background: Several high-throughput searches for ppotential natural antisense transcripts (NATs) have been performed recently, but most of the reports were focused on cis type. A ...
Yuan-Yuan Li, Lei Qin, Zong-Ming Guo, Lei Liu, Hao...